Naruto X

AN: So I've been intending to rewrite the first three chapters since I wasn't happy with them and it broke a lot of what I was writing with when I continued this story.

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Sigma deflected an energy blast with his sword as he jumped back. The three hunters before him had their sights set on the maverick leader and he simply laughed. "You three have hounded me for so long, but that ends now." He said before the room began to illuminate with light and a machine that looked like a ring was near the wall.

Sigma turned and ran towards the machine which turned on and the middle of the ring suddenly shifted to a strange purple light that Sigma leapt into and vanished. Zero was about to chase after him but X put a hand on his shoulder and stopped him. "Wait, we can't just rush in after him, it might be a trap." He said before he opened his communicator. "Alia, can you get a reading on that portal and copy its coordinates?"

-Meanwhile in Konoha-

Mizuki swung his arm and let the shuriken fly. Just as it was closing in on the boy, there was a buzzing noise before the weapon suddenly hit the ground from lost momentum and it was split in two.

Iruka and Naruto stared in awe of the man that had suddenly appeared before them, towering over them all at nearly seven feet tall was a tall bald man with a red dot on his forehead, a green and black outfit that looked form fitting, brown boots and a red cape that was flowing behind him. What really caught their attention was the green sword the man had that looked like it was made out of light.

"Whoa…" Naruto said in awe, but that was short lived as the man glanced at all of them and suddenly his smile changed to a wicked grin and in a flash he was gone and had reappeared behind Mizuki, the mans eyes widened before he suddenly split apart at the waist and fell over.

Iruka was frozen in shock and just as the man was about to charge him, he stopped to backhand a blonde boy that tried to tackle him, only for the boy to disappear in a puff of smoke.

"Don't lay your hands on my teacher!" Naruto said as he made a cross shaped hand sign and with a cry of shadow clone jutsu, the entire forest was suddenly filled with thousands of Naruto's.

The man looked surprised for a moment and then grinned. "Don't disappoint me now." He said as the thousands of clones charged him.

It was a massacre to say the least. Despite having the advantage, the boy wasn't getting a single hit in on the man. He punched, kicked, slashed, cleaved and even his cape was acting as a weapon and the clone army was falling rapidly.

Suddenly he grinned and said "I've had enough of this." And charged straight through the group of clones, sending some flying and others immediately poofing out of existence before he grabbed one in particular which didn't explode on contact before he slammed him into the ground, he had known where the real one was the entire time!

He picked Naruto up and flung him into a nearby tree and chased after the boy. Naruto pulled out a kunai and threw it at Sigma who smacked it aside with his hand before swinging his sword. Naruto could only stare in shock as he watched half of his arm fall down to the ground before reality caught up and he began to scream in pain.

Sigma let out a cold laugh before he did a sweeping motion with the sword, taking Naruto's legs off and then a downward slash which took the boys other arm off and slashed across his stomach.

Sigma's laughter only got louder as Naruto's screams intensified. He stabbed his sword through the back of the boys head and it went through one of his eyes and the boy stopped screaming and his body began to twitch violently before the man used his foot to roll the boy over and began to stab into random spots on his chest.

Suddenly he turned and caught one of the giant shuriken from before and crushed it in his hand with a single motion which made Iruka freeze in shock, his anger momentarily gone as he realized just how in over his head he was as the man began to walk towards him, looking amused more than anything. He was going to die.

Suddenly the man looked to the side and leapt back as a blast of energy flew right past him. Iruka's eyes widened in shock before he looked at where the blast had come from, standing off to the side were three men, one in blue armor, one in red and one in black.

"Stop it Sigma!" the man in blue said which only got a laugh from the man. "You have a choice hunters, you can chase me, or you can let that one die." He said with a nudge towards the torso that was Naruto.

The hunters eyes widened in shock as Sigma quickly retreated, laughing the entire way. The one in red let out a curse as the three ran up to the boy and in a flash of light, the three of them had vanished along with Naruto.