Bernard and Bianca are on their way to help find Cody, a missing boy in Australia, but the forest of Ferngully is on alert as well. Crysta and Pips are debating what to do when their human friend Zak Young shows up asking for help to rescue his cousin, Cody, from the clutches of the evil poacher McLeach, so they decide to help. Can Cody be saved?

After losing her master at croc falls, joanna the goanna tries to survive on her own & wanders off into fern gully. After a week of unsuccessful attempts at getting a decent meal, she collapses & is found by a certain male goanna who decides to give her a chance, despite the fact that she used to be a human pet. Will Joanna finally get her 2nd chance? Or will it all fall apart?