Author's Note: Due to a debacle, I have decided to take down the last two chapters of this story. I suck. Long story short, uhh… Hermione goes down, sees the mirror, hides in a closet, Quirrell comes, Potter comes, fight ensues, and then Hermione is going to go out of the closet to get the stone but then Dumbledore comes. He decides to give her the benefit of the doubt (in which she's calling him an idiot in her thoughts) and they leave.
She eavesdrops at the hospital wing to learn more about the stone and what happened, and then there is the final feast and the year ends.
When I get some more free time (buried in work right now) I will rewrite this chapters, but for now I thought I would at least give a summary to those who are like 'why did this just end' I promise that you should all just go to Year 2 anyways even if you're getting a bad impression of me!